Computational Precision Health

University of California, Berkeley

About the Program

Computational Precision Health (CPH) is an exploding field across both academia and industry. This rapidly evolving field integrates the tremendous advances in data science and data availability that have occurred over the past decades with expertise in clinical medicine, public health, and health care systems to enable a paradigm shift in the ways we treat and prevent disease. Advances in data and analytics open the door to faster deployment of more effective health interventions, but this potential can only be achieved if the underlying computational and analytic tools are conceived, tested, and validated for the health and health care needs of diverse individuals and communities. The field of Computational Precision Health aims to realize this potential.

The Designated Emphasis in CPH is administered by the joint UC Berkeley/UCSF Computational Precision Health Augmented Graduate Group. The UCB CPH DE allows PhD students from affiliated UCB programs to incorporate CPH courses and advising into their PhD. CPH DE students will receive a solid grounding in the fundamentals of computational precision health, with training in the application of computation to the practice of medicine and public health. Students will be part of an interdisciplinary, intercampus community of UC Berkeley and UCSF scholars with diverse academic backgrounds, providing unique cross-campus opportunities, including direct exposure to the clinical care and health science environment offered at UCSF.

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Admissions

Please apply at least two semesters before your Qualifying Examination by submitting the following materials to the Computational Precision Health Program, by emailing the documents below to cph.info@berkeley.edu.

  • Petition for Admission to the Designated Emphasis in Computational Precision Health.
  • Letter of intent summarizing your research interests and background in Computational Precision Health. When possible, the letter should include one or more CPH Core Graduate Group faculty members from your home campus as potential DE advisors.
  • Letter of recommendation from a CPH Graduate Group Core or Affiliate faculty member, ideally from your home campus. DE students will be assigned a CPH DE Advisor at time of acceptance to the DE program. The DE Advisor will be a Core member of the Graduate Group from your home campus and cannot be the same person as the student’s Dissertation Advisor.

Designated Emphasis Requirements

Curriculum/Coursework

Students admitted to the CPH DE program must complete two semesters of the CPH Doctoral Seminar, and at least 3 courses from the core course list below, in the following two domain areas:

  1. Health and Public Health Sciences
  2. Computing and Statistical Sciences

In order to ensure that the DE confers sufficient additional breadth beyond a student’s home program, students in a primarily computational PhD program (for example, Bioengineering, Electrical Engineering and Computer Science, Computer Science, Statistics, Biostatistics, Computational Biology, Industrial Engineering and Operations Research) will be required to take at least two courses in the health domain; those in Epidemiology and Health Policy will be required to take at least two courses in the Computational Sciences domain. For those students outside of computational PhD programs, the DE Advisor will provide guidance on the appropriate balance of courses between the two domains.

Core Courses

Qualifying courses are listed below. Additional courses falling within the two domains below may also qualify, to be approved by the student’s DE advisor.

1. Health and Public Health Science

Clinical Reasoning and Personalized Medicine: diagnosis and treatment, evidence-based medicine
PB HLTH W250BEpidemiologic Methods II4
PB HLTH W226CEconomics of Population Health3
PB HLTH 255DMethods in Social Epidemiology2
PB HLTH 222ABiomedical Innovation Policy3
PB HLTH 235Impact Evaluation for Health Professionals3

2. Computing and Statistical Sciences

COMPSCI 289AIntroduction to Machine Learning4
COMPSCI 286AIntroduction to Database Systems4
COMPSCI C281A/STAT C241AStatistical Learning Theory3
STAT 156Causal Inference4
STAT 154Modern Statistical Prediction and Machine Learning4

In some cases, for example, STAT 154 and STAT 156/STAT 256, an upper division undergraduate course may be acceptable for the DE. This is due to the desire to accommodate students from non-computational PhD programs who may not have the programming, mathematics or statistics prerequisites for corresponding graduate-level coursework.

CPH Doctoral Seminar

In addition, students will participate in at least 2 semesters of the CPH Doctoral Seminar. The seminar will consist of a combination of journal club-style discussion of recent literature in Computational Precision Health, and guest faculty speakers drawn from across the CPH Graduate Group and beyond. This seminar will be held in conjunction with UCSF DE CPH students.

Elective Courses

No Elective courses are required for the Designed Emphasis, but the DE Advisor may guide students on additional courses to supplement their training in this field.

UC Berkeley Affiliated Programs

PhD in Bioengineering

PhD in Electrical Engineering and Computer Sciences

PhD in Computer Science

PhD in Biostatistics

PhD in Statistics

PhD in Computational Biology

PhD in Epidemiology

PhD in Health Policy

PhD in Industrial Engineering and Operations Research

Normative Time

No additional time can be added to the normative time of your home department.

Contact Information

Computational Precision Health

cph.info@berkeley.edu

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Director, UC Berkeley UCSF Joint Program in Computational Precision Health

Maya Petersen, MD, PhD

mayaliv@berkeley.edu

Director, UC Berkeley UCSF Joint Program in Computational Precision Health

Ida Sim, MD, PhD

ida.sim@ucsf.edu

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